Chris C Flerin (cflerin)

cflerin

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Location:Belgium

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vib-singlecell-nf

Chris C Flerin's starred repositories

MonitorControl

🖥 Control your display's brightness & volume on your Mac as if it was a native Apple Display. Use Apple Keyboard keys or custom shortcuts. Shows the native macOS OSDs.

Language:SwiftLicense:MITStargazers:26850Issues:153Issues:883

nextflow

A DSL for data-driven computational pipelines

Language:GroovyLicense:Apache-2.0Stargazers:2630Issues:87Issues:3137

rpi-clone

A shell script to clone a booted disk.

Language:ShellLicense:BSD-3-ClauseStargazers:2498Issues:122Issues:161

gganimate

A Grammar of Animated Graphics

Language:RLicense:NOASSERTIONStargazers:1935Issues:60Issues:448

deconz-rest-plugin

deCONZ REST-API plugin to control ZigBee devices

Language:C++License:BSD-3-ClauseStargazers:1881Issues:109Issues:5873

datacurator-filetree

a standard filetree for /r/datacurator [ and r/datahoarder ]

Language:MakefileLicense:MITStargazers:1456Issues:55Issues:59

jupyterlab-vim

:neckbeard: Vim notebook cell bindings for JupyterLab

Language:TypeScriptLicense:MITStargazers:968Issues:19Issues:103

anndata

Annotated data.

Language:PythonLicense:BSD-3-ClauseStargazers:535Issues:14Issues:692

patterns

A curated collection of Nextflow implementation patterns

Language:NextflowLicense:MITStargazers:321Issues:24Issues:20

scib

Benchmarking analysis of data integration tools

Language:PythonLicense:MITStargazers:283Issues:14Issues:182

glow

An open-source toolkit for large-scale genomic analysis

Language:ScalaLicense:Apache-2.0Stargazers:262Issues:19Issues:157

scRNAseq_Benchmark

Bench-marking classification tools for scRNA-seq data

Language:PythonLicense:MITStargazers:181Issues:7Issues:16

Beeline

BEELINE: evaluation of algorithms for gene regulatory network inference

Language:PythonLicense:GPL-3.0Stargazers:167Issues:14Issues:84

sinto

Tools for single-cell data processing

Language:PythonLicense:MITStargazers:112Issues:2Issues:61

dsb

Normalize CITEseq Data

Language:RLicense:NOASSERTIONStargazers:63Issues:10Issues:43

pycisTopic

pycisTopic is a Python module to simultaneously identify cell states and cis-regulatory topics from single cell epigenomics data.

Language:Jupyter NotebookLicense:NOASSERTIONStargazers:55Issues:12Issues:121

arboreto

A scalable python-based framework for gene regulatory network inference using tree-based ensemble regressors.

Language:Jupyter NotebookLicense:BSD-3-ClauseStargazers:49Issues:6Issues:33

postgap

Linking GWAS studies to genes through cis-regulatory datasets

Language:Jupyter NotebookLicense:Apache-2.0Stargazers:39Issues:8Issues:163

bap

Bead-based single-cell atac processing

Language:PythonLicense:MITStargazers:31Issues:5Issues:38

single_cell_toolkit

Tools for correcting single cell barcodes for various scATAC-seq techniques.

LRS_SV_sets

VCF files of SVs using long-read sequencing (LRS).

popscle_helper_tools

Helper tools for popscle

iRODS-User-Training

Slides, exercises and extra files for the iRODS course at KU Leuven

Language:ShellStargazers:5Issues:0Issues:0

nanowgs

Nextflow pipeline for Nanopore WGS analysis

Language:NextflowStargazers:4Issues:2Issues:0

telescope

Telescope server repository

Language:PythonLicense:NOASSERTIONStargazers:2Issues:2Issues:0
Language:ShellLicense:Apache-2.0Stargazers:1Issues:2Issues:4

dotfiles

My dotfiles

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