cflerin

scib

Benchmarking analysis of data integration tools

dsb

Normalize CITEseq Data

pycisTopic

pycisTopic is a Python module to simultaneously identify cell states and cis-regulatory topics from single cell epigenomics data.

nanowgs

Nextflow pipeline for Nanopore WGS analysis

hydrop_data_analysis

LRS_SV_sets

VCF files of SVs using long-read sequencing (LRS).

iRODS-User-Training

Slides, exercises and extra files for the iRODS course at KU Leuven

single_cell_toolkit

Tools for correcting single cell barcodes for various scATAC-seq techniques.

singlecellRNA_melanoma_paper

bap

Bead-based single-cell atac processing

nextflow

A DSL for data-driven computational pipelines

rpi-clone

A shell script to clone a booted disk.

MonitorControl

🖥 Control your display's brightness & volume on your Mac as if it was a native Apple Display. Use Apple Keyboard keys or custom shortcuts. Shows the native macOS OSDs.

deconz-rest-plugin

deCONZ REST-API plugin to control ZigBee devices

sinto

Tools for single-cell data processing

popscle_helper_tools

Helper tools for popscle

postgap

Linking GWAS studies to genes through cis-regulatory datasets

gganimate

A Grammar of Animated Graphics

arboreto

A scalable python-based framework for gene regulatory network inference using tree-based ensemble regressors.

glow

An open-source toolkit for large-scale genomic analysis

telescope

Telescope server repository

anndata

Annotated data.

scRNAseq_Benchmark

Bench-marking classification tools for scRNA-seq data

dotfiles

My dotfiles

datacurator-filetree

a standard filetree for /r/datacurator [ and r/datahoarder ]

patterns

A curated collection of Nextflow implementation patterns

Beeline

BEELINE: evaluation of algorithms for gene regulatory network inference

jupyterlab-vim

:neckbeard: Vim notebook cell bindings for JupyterLab

SinglePython

Portash