Augustin Luna's repositories
ihop-reach
A web application to access biological data extracted from biomedical literature.
docker-nodejs-http-server
NodeJS with HTTP Server
MeSHHeading2vec
MeSHHeading2vec: A new method for representing MeSH headings as vectors based on graph embedding algorithm
shiny_network
Example R Shiny application cytoscape/cyjShiny
adaptive-count-ception
This the repository for HKUST COMP4901J final project. We add some residual adapters to the coun-ception network so that it can quickly adapt to new domain.
biomodels-layout
Example code to layout out SBGN files using Paxtools
captainhook
A generic webhook endpoint that runs scripts based on the URL called
cgdsr
R-Based API for accessing the MSKCC Cancer Genomics Data Server (CGDS)
covid19-analysis
Analyze Disease Maps and Indra COVID19 Datasets
edward
A probabilistic programming language in TensorFlow. Deep generative models, variational inference.
ggcor
Extended tools for correlation analysis and visualization.
grounding-search
A biological entity grounding search service
libsbgn
Libraries for the Systems Biology Graphical Notation (SBGN); Java and C++
listutils
Utilities to work with list and lists of vectors.
mutationhotspots
Algorithms to detect mutational hotspots
rcellminerDemoData
Demo data package compatible with rcellminer
sbgnviz.js-sample-app
A sample application for SBGNViz
slingshot
Functions for identifying and characterizing continuous developmental trajectories in single-cell data.