bsungwoo

grok-1

Grok open release

faiss

A library for efficient similarity search and clustering of dense vectors.

vllm

A high-throughput and memory-efficient inference and serving engine for LLMs

pytorch-grad-cam

Advanced AI Explainability for computer vision. Support for CNNs, Vision Transformers, Classification, Object detection, Segmentation, Image similarity and more.

WizardLM

LLMs build upon Evol Insturct: WizardLM, WizardCoder, WizardMath

geopandas

Python tools for geographic data

TCN

Sequence modeling benchmarks and temporal convolutional networks

alphageometry

PINNs

Physics Informed Deep Learning: Data-driven Solutions and Discovery of Nonlinear Partial Differential Equations

torchio

Medical imaging toolkit for deep learning

MedicalNet

Many studies have shown that the performance on deep learning is significantly affected by volume of training data. The MedicalNet project provides a series of 3D-ResNet pre-trained models and relative code.

scGPT

Awesome-LLM-RAG

Awesome-LLM-RAG: a curated list of advanced retrieval augmented generation (RAG) in Large Language Models

goatools

Python library to handle Gene Ontology (GO) terms

M3d-Cam

plotai

PlotAI - Your Ultimate Plotting Assistant! 📊🤖 Use ChatGPT-3.5 to create plots in Python and Matplotlib directly in your Python script or notebook.

clustergrammer

An interactive heatmap visualization built using D3.js

cellxgene_VIP

Enables cellxgene to generate violin, stacked violin, stacked bar, heatmap, volcano, embedding, dot, track, density, 2D density, sankey and dual-gene plot in high-resolution SVG/PNG format. It also performs differential gene expression analysis and provides a Command Line Interface (CLI) for advanced users to perform analysis using python and R.

rapids_singlecell

Rapids_singlecell: A GPU-accelerated tool for scRNA analysis. Offers seamless scverse compatibility for efficient single-cell data processing and analysis.

EvoBind

In silico directed evolution of peptide binders with AlphaFold

RAG-Chatbot-with-Confluence

RAG Chatbot with Confluence

cellxgene-gateway

Cellxgene Gateway allows you to use the Cellxgene Server provided by the Chan Zuckerberg Institute (https://github.com/chanzuckerberg/cellxgene) with multiple datasets.

arkzip

Ark 라이브러리를 사용한 범용 압축 해제 프로그램.

AutoBA

An AI Agent for Fully Automated Multi-omic Analyses

SpatialScope

A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models

Lamian

Ceograph

CEll spatial Organization-based graph convolutional network

CELLama

CELLama Project

STopover

capturing spatial colocalization and interaction in the TME using topological analysis in spatial transcriptomics data

cellxgene-prepare

cli for preprocessing data for use with cellxgene