Giters
Broad Institute (broadinstitute)

Broad Institute

broadinstitute

Organization data from Github https://github.com/broadinstitute

Broad Institute of MIT and Harvard

Location:Cambridge, MA

Home Page:http://www.broadinstitute.org/

GitHub:@broadinstitute

Twitter:@broadinstitute

Broad Institute's repositories

wdl-ide

Rich IDE support for Workflow Description Language

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delphy

Fast, scalable, accurate and accessible Bayesian phylogenetics

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PANOPLY

Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis Consortium (CPTAC)

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epi-SHARE-seq-pipeline

Epigenomics Program pipeline to analyze SHARE-seq data.

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agora

It's a methods repository!

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EmmaEmb

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python-sudoers

Python library for parsing a Linux sudoers file

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juniper0

JUNIPER: Large-Scale Outbreak Reconstruction

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ops-terra-utils

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TAG-public

Official workflows published by the Broad Institute's Genomics Platform Translation Analysis Group (TAG)

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viral-workshops

Documentation for viral analysis workshops

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pattern-storybook

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dig-aggregator-methods

Monorepo of methods implemented for the Aggregator

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jati

DSL support library for Rust

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sherlock

DSP DevOps's deployment source-of-truth service

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DropSift

cell caller for sn/snRNA sequence data

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2021_09_01_VarChAMP_CellProfiler_Pipeline

Instructions and recipes to run Distributed CellProfiler for processing VarChAMP variant painting images in the CS lab.

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BEClust3D

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bits-appengine

BITS AppEngine Python Package

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delphy-2024-paper-data

Benchmark data and run results for 2024 Delphy paper

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depmap_omics_upload

Subset and upload data to taiga for DepMap data releases

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Drop-seq-wdl

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epi-lims-workflows

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genemasker

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GeneTEA

Gene-Term Enrichment Analysis (GeneTEA)

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glama

Genomic long-read analysis modules and applications

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mitograph

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modal

Ontology for biological nature of information from an experimental activity, independent of method.

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puppet-postfix

Puppet Postfix module

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uger-instructions

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