atlasbioinfo

RSVdb

A comprehensive database of in vivo mRNA structures.

SearchDuplicateFiles

Python写的文件去重，递归找文件，计算MD5，去重；File deduplication script in Python.

CRISPR-CBEI

A web-based designing tool for Cytosine Base Editor mediated gene Inactivation

barcodeSpliter

midseq

Get midseq form fastq reads

404ForRNAstructure

404.html for RNA structure, just for fun :) Implement it by fornac.js

atlasbioinfo.github.io

Personal home page

2023-learn-vue3

Personal notes for https://www.youtube.com/watch?v=I_xLMmNeLDY&t=6126s

AtlasbioinfoSeqTools

HTS related tools

AtlasBioinfoToolkit

Front-end bioinformatics tools

blog

Deprecated. Please check https://github.com/atlasbioinfo/blogs or blog.atlasbioinfo.com

blogs

My blog records bioinformation-related experiences as well as personal daily life.

DeepDRU

Decipher the rules which mRNA structure differs in vivo and in vitro by deep neural networks

atlasflask

A generic model for my project's Flask backend

ChatbotFrontendUI

Simple Chatbot Frontend UI, base on vue3 and quasar

DNA2RNA

Front-end tool for DNA->RNA conversion

documents

fqfinder

Find reads that contain a specific sequence in fastq

igv.js

Embeddable genomic visualization component based on the Integrative Genomics Viewer

im-seeker

A Webserver for DNA I-motifs prediction and scoring via Automated Machine Learning

KillerSudokuSolver

killer sudoku solver

myDLNotes_Pytorch

学习http://tangshusen.me/Dive-into-DL-PyTorch的笔记

open-webui

User-friendly WebUI for LLMs (Formerly Ollama WebUI)

ORF-finder

Finds all open reading frames (ORFs) in a DNA sequence

ORFViewer

Visualize 6 ORF reading frames (+1, +2, +3, -1, -2 ,-3).

Python-100-Days

Python - 100天从新手到大师

RDR2CollectorsMap

RNAFramework

RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis

testSAMTOOLS

Test samtools commands

UTRpro

UTR expand project, processing