atlasbioinfo

Haopeng Yu's starred repositories

graphrag

A modular graph-based Retrieval-Augmented Generation (RAG) system

Language:PythonMIT1201600

BERTopic

Leveraging BERT and c-TF-IDF to create easily interpretable topics.

Language:PythonMIT582100

miniforge

A conda-forge distribution.

Language:ShellNOASSERTION582400

mailinabox

Mail-in-a-Box helps individuals take back control of their email by defining a one-click, easy-to-deploy SMTP+everything else server: a mail server in a box.

Language:PythonCC0-1.01374000

Your AI second brain. Get answers to your questions, whether they be online or in your own notes. Use online AI models (e.g gpt4) or private, local LLMs (e.g llama3). Self-host locally or use our cloud instance. Access from Obsidian, Emacs, Desktop app, Web or Whatsapp.

Language:PythonAGPL-3.01204100

chatgpt-web

A third-party ChatGPT Web UI page built with Express and Vue3, through the official OpenAI completion API. / 用 Express 和 Vue3 搭建的第三方 ChatGPT 前端页面, 基于 OpenAI 官方 completion API.

Language:VueMIT156200

langflow

⛓️ Langflow is a visual framework for building multi-agent and RAG applications. It's open-source, Python-powered, fully customizable, model and vector store agnostic.

Language:JavaScriptMIT2191000

litellm

Call all LLM APIs using the OpenAI format. Use Bedrock, Azure, OpenAI, Cohere, Anthropic, Ollama, Sagemaker, HuggingFace, Replicate (100+ LLMs)

Language:PythonNOASSERTION1059900

sec-insights

A real world full-stack application using LlamaIndex

Language:TypeScriptMIT222600

open-webui

User-friendly WebUI for LLMs (Formerly Ollama WebUI)

Language:SvelteMIT3184000

chatgpt-web

用 Express 和 Vue3 搭建的 ChatGPT 演示网页

Language:VueMIT3102000

ragflow

RAGFlow is an open-source RAG (Retrieval-Augmented Generation) engine based on deep document understanding.

Language:PythonApache-2.01234200

rna3db

A dataset for training and benchmarking deep learning models for RNA structure prediction

Language:PythonMIT3300

postal

📮 A fully featured open source mail delivery platform for incoming & outgoing e-mail

Language:RubyMIT1446000

GPT-SoVITS

1 min voice data can also be used to train a good TTS model! (few shot voice cloning)

Language:PythonMIT2940600

core

Vue-Powered Static Site Generator

Language:TypeScriptMIT218400

reactivesearch

Search UI components for React and Vue

Language:JavaScriptApache-2.0488700

TalkToModel

TalkToModel gives anyone with the powers of XAI through natural language conversations 💬!

Language:PythonMIT10500

IBSpy

Python library to identify Identical By State regions

Language:C++MIT1000

gitblog

基于git issue的轻量级个人博客模板。

Language:JavaScriptMIT14300

qinglong

支持 Python3、JavaScript、Shell、Typescript 的定时任务管理平台（Timed task management platform supporting Python3, JavaScript, Shell, Typescript）

Language:TypeScriptApache-2.01514900

scSPORT

scSPORT: a Single-cell RNA Structure Probing Method

Language:Jupyter NotebookMIT500

ollama

Get up and running with Llama 3, Mistral, Gemma 2, and other large language models.

Language:GoMIT7925200

TinyChatEngine

TinyChatEngine: On-Device LLM Inference Library

Language:C++MIT64000

FLEPSeq

The analysis pipeline for FLEP-seq

Language:Jupyter Notebook1300

arnie

Python utility to estimate, compare, and reweight RNA energetics across many secondary structure algorithms.

Language:PythonMIT9300

llamafile

Distribute and run LLMs with a single file.

Language:C++NOASSERTION1721000

GoMusic

迁移网易云/QQ音乐歌单至 Apple/Youtube/Spotify Music

Language:GoMIT82900

DNABERT_2

[ICLR 2024] DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genome

Language:ShellApache-2.021800

llama-recipes

Scripts for fine-tuning Meta Llama3 with composable FSDP & PEFT methods to cover single/multi-node GPUs. Supports default & custom datasets for applications such as summarization and Q&A. Supporting a number of candid inference solutions such as HF TGI, VLLM for local or cloud deployment. Demo apps to showcase Meta Llama3 for WhatsApp & Messenger.

Language:Jupyter Notebook1052500