atlasbioinfo / AtlasbioinfoSeqTools

HTS related tools

AtlasBioinfoSeqTools

AtlasBioinfoSeqTools is a collection of bioinformatics tools designed to process and analyze sequence data. The toolkit aims to provide researchers and bioinformaticians with efficient and user-friendly utilities to facilitate genomic and transcriptomic research.

Table of Contents

• AtlasBioinfoSeqTools
  • Table of Contents
  • Features
  • Installation
  • Usage
    • bam2MaP
  • Contributing
  • Contact

Features

• bam2MaP: Process DMS-MaP, SHAPE-MaP output, and more.
• Add other tools as you develop them

Installation

pip install AtlasBioinfoSeqTools

Usage

bam2MaP

usage: bam2MaP.py [-h] [-o OUTPUT] i

This module is used to process DMS-MaP, SHAPE-MaP output to complete the first step after mapping...

Add usage details for other tools as you develop them.

Contributing

Contributions, issues, and feature requests are welcome. For major changes, please open an issue first to discuss what you would like to change.

Contact

Haopeng Yu - [e-mail]

Project Link: https://github.com/atlasbioinfo/AtlasbioinfoSeqTools.git