allisonheath

UDR

A UDT wrapper for rsync that improves throughput of large data transfers over long distances.

allisonheath.github.io

avrodoc

Documentation tool for Avro schemas

elasticsearch-hadoop

:elephant: Elasticsearch real-time search and analytics natively integrated with Hadoop

fauxdictionary

Experiments in data dictionaring

ga4gh-cp.github.io

GA4GH Clinical/Phenotypic Data Capture Workstream

novacluster

wrapper over openstack nova api to launch clusters on osdc systems

open-data-registry

A registry of publicly available datasets on AWS

osdc_support

OSDC end user documentation. Served at https://www.opensciencedatacloud.org/support

osdcquery

Query client for OSDC metadata.

PCAP-core

NGS reference implementations and helper code for the IGCG/TCGA Pan-Cancer Analysis Project

public-workflows

A place to collaborate on public SeqWare workflows

saltbox

Some salt to make my life easier

seqware

This is the SeqWare Project's main repo.

sparktoys

Just a place to keep some quick spark experiments

StarCluster

StarCluster is an open source cluster-computing toolkit for Amazon's Elastic Compute Cloud (EC2).

tame

Taming the metadata beast

wf-exp

Experiments with workflows and dockers