INCLUDE Data Coordinating Center's repositories
include-linkml
LinkML Schema for INCLUDE DCC
data-models
Data models for INCLUDE Data Curator app
whistle-ingest-linkml
Whistle ingest based on the linkml model
clinical-include-r
Shiny application that displays clinical data
clinical_data_model_etl
Harmonize clinical data to data model
data_curator
Data Ingest Shiny App
DMC_v3_tasks
Issues for DMC v3 project board
ds-connect-whistle
Whistle projector for ingesting DS-Connect into FHIR
inc-portal-model
Portal model Whistler Project to ETL include data into FHIR
include-shiny-template
:construction: Repo template for INCLUDE Shiny apps
include-users-api
API to manage Include users
kf-etl-clin-portal
Import clinical data into portal
ontology_mappings
Code and resources for handling ontology mappings
pub-include-r
Tools to aggregate and Shiny app to explore INCLUDE publications and associated datasets
DMC_V3_Roadmap
Board for May Release Roadmap
fhir-ingest-htp
scripts used to load HTP data into KF dev FHIR server
FHIR-Utils
Scripts used to help with ingestion into FHIR for various datasets
harmonica
Tooling to harmonize condition data to ontology terms.
htp-whistle
Whistle projections for ingesting HTP data into FHIR
include-fhir-access
Overview of how users might access the INCLUDE FHIR servers
include-keyckloak-ext
Include Keycloak Extension