Alessandro Felder's starred repositories
openMINDS_SANDS
A metadata model capturing Spatial Anchoring of Neuroscience Data Structures, including brain atlas definitions.
brainglobe-utils
Shared general purpose tools for the BrainGlobe project
course-dec-2023
Materials for the BrainGlobe & napari course at the Sainsbury Wellcome Centre
course-extracellular-ephys-analysis
Covering how to build electrophysiology pipelines with SpikeInterface
ood-dash-plotly-app
Wrapper around a dash-plotly app to render it via Open OnDemand
slides-templates-atlases
On brain templates & atlases, and how to build them.
brainglobe-template-builder
Build unbiased anatomical templates from individual images
brainglobe-workflows
Workflows that utilise BrainGlobe tools to perform data analysis and visualisation.
brainglobe-meta
(Meta-)package repository for BrainGlobe's Python tools for computational neuroanatomy.
brainglobe-stitch
A napari plugin for stitching large tiled 3D imaging datasets
brainglobe.github.io
brainglobe.info website
slides-behavioural-projects-overview
Slides giving an overview of NIU's behavioural analysis projects.
software-practice-template
A template to generate repositories used to teach SE best practices
course-software-good-practice
Slides for NIU collaborative coding and software development good practices
course-data-management-neuroblueprint
Toy examples highlighting good data management practices
neuroinformatics-unit.github.io
Home website of the Neuroinformatics Unit
oss-documents
Collecting guidance, documents, examples, templates for open-source software project, such as on governance, roadmaps, contributing, license, code of conduct
python-tooling
Python package template for new research software projects