Ravindra Raut's repositories

cv

My CV built using RMarkdown and the pagedown package.

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ExplorATEproject

R package to explore active transposable elements with RNA-seq data

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personal-website

Personal Website

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TEs_genes_relationship_pipeline

Distribution of TEs and their relationship to genes in host genome

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cs-video-courses

List of Computer Science courses with video lectures.

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CV-1

:scroll: My Data Driven CV written with R, YAML, & LaTeX

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DoubletFinder

R package for detecting doublets in single-cell RNA sequencing data

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EarlGrey

Earl Grey: A fully automated TE curation and annotation pipeline

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ggcoverage

Visualize and annotate genomic coverage with ggplot2

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ggtree

:christmas_tree:Visualization and annotation of phylogenetic trees

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ggtreeExtra

:lemon: Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”

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github-slideshow

A robot powered training repository :robot:

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iqtree_full

input for iqtree intact LTR

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Kishore901

Github profile

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MDNotebooks

Jupyter Notebooks for Molecular Dynamics

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Python-for-Biologist

some simple python codes for biology

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Random_Scripts

Scripts I made for random tasks

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ravindra-raut

my personal website

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recount-brain-bog19

Poster for EMBO2021-The Mobile Genome

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repeatR

read and analyse RepeatMasker output

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resume-1

my resume built in R with pagedown::html_resume

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seurat

R toolkit for single cell genomics

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TE_ManAnnot

Accompanying repository for our publications on manual curation methods for Transposable Elements.

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training-collection

Collection of bioinformatics training materials

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treeio

:seedling: Base Classes and Functions for Phylogenetic Tree Input and Output

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