Jonathan Bouvette's repositories
cliYAML
create CLI tools and argument parser using a YAML file
CryoPicam
Fast speed imaging of moving Cryo-EM specimens with time resolution using rasberry Pi4
cs_jiffies
Short but hopefully useful CryoSPARC scripts.
PACEtomo
Parallel cryo electron tomography via beam image shift
ptolemy-smartscope
Public release of Ptolemy package for automated targeting of Cryo-EM grids
scipion-em-cistem
Plugin to use cisTEM programs within the Scipion framework
scipion-em-isonet
This plugin is a Scipion wrapper for Isonet, a cryo-electron tomography software for filling the missing wedge information. The official webpage of the software is https://isonetcryoet.com/ and the source code can be found at https://github.com/IsoNet-cryoET/IsoNet
scipion-em-sphire
Plugin to use Sphire programs within the Scipion framework
SmartScope-connector
Python module to interact with SmartScope data
SmartScope-dev
SmartScope is a framework for systematic evaluation of cryo-EM specimens