Health Data Research UK

datasets

HDR UK Gateway Datasets

schemata

HDR UK Schemas

gateway-web

HDR UK Gateway Web

papers

Extract of publications that mention HDR-UK

CaRROT-CDM

gateway-api

HDR UK Gateway API

hutch

Former repo for Hutch

fma-dataloads

FMA ingestion script

Gateway-Auth-Server

risk-score-builder

Map clinical risk score concepts to structured definitions using ontologies, calculate structured risk scores from NLP.

synthea

Synthetic Patient Population Simulator

Winterfell

Generate complex, validated and extendable JSON-based forms in React.

accredited-researchers-api

Accredited Researchers API Stub

CaRROT-Docs

Documentation

clinical-trials

gateway-helm-charts

A collection of helm charts based on applications

gateway-widgets

Gateway widgets for collaborators

GatewayAutomation

Regression Automation test scripts

MedCAT

Medical Concept Annotation Tool

MedCATservice

Running MedCAT as a RESTful web service

MedCATweb

This repo provides a simple interface to inspect, improve and add concepts to biomedical NER+L model (e.g. MedCAT) and a further interface for research specific training data collection

medicines-dashboard

A medicine dashboard

openprescribing

A Django app providing a REST API and dashboards for the HSCIC's GP prescribing data

PGS_Catalog

An open database of polygenic scores and relevant metadata needed to apply and evaluate them correctly.

rake-nltk

Python implementation of the Rapid Automatic Keyword Extraction algorithm using NLTK.

RDMP

Research Data Management Platform (RDMP) is an open source application for the loading,linking,anonymisation and extraction of datasets stored in relational databases.

react-core

synthea-profiling

tools

HDR UK Gateway Tools

uprn-match