DReichLab / AdmixTools

Tools test whether admixture occurred and more

DReichLab/AdmixTools Issues

Compilation and installation errors of 8.0.0 on RHEL9
Closed 2 months ago2
High standard errors in qpDstat results
Updated 3 months ago2
Geno to VCF conversion
Updated 4 months ago3
Convertf error "fatalx: no valid samples!"
Updated 4 months ago1
how to convert `v54.1.p1_1240K_public.snp` to aligned fasta format data?
Updated 4 months ago6
Using f3 to test gene flow from ghost species
Updated 8 months ago3
AdmixTools For Windows
Updated 8 months ago1
qpAdm - "pop: ??? has sample size 1 and inbreed set" error message
Updated 2 years ago2
examples/qpWave.log is missing
Closed 2 years ago1
Warning while using mergeit
Updated 2 years ago
Nothing happens when using convertf for PACKEDPED to PACKEDANCESTRYMAP
Closed 2 years ago2
only 71 lines and truncated
Updated 2 years ago
Not enough RAM for qpfstats?
Closed 2 years ago1
something about qpGraph
Updated 2 years ago
What‘s mean the "best" in the result from the qpDstat?
Updated 2 years ago
Negative outgroup f3 statistics
Closed 2 years ago
qpDstat Segmentation fault (core dumped)
Updated 2 years ago
qpWave - Segmentation fault (core dumped)
Updated 2 years ago9
qpAdm: command not found
Closed 2 years ago
Compilation issues on the latest macOS Monterey (M1 Mac)
Updated 2 years ago1
warning: bad chrom
Updated 3 years ago2
Install issue
Updated 3 years ago2
qpF4Ration
Updated 3 years ago
Issue with directories with spaces during install
Updated 3 years ago
qpadm with single sample - is it possible to run?
Closed 3 years ago2
zsh: segmentation fault (core dumped)
Updated 3 years ago1
ERROR: insufficient number of blocks -- you need 5 blocks with non zero ABBA/BABA program terminating.
Updated 3 years ago2
some questions about result of D-statistics(qpDstat)
Updated 3 years ago1
instaling openblas on mac
Closed 3 years ago1
qpDstat not using numchrom from parameter file
Closed 3 years ago2
Error in the source code?
Closed 3 years ago1
qpDstat not producing any D-statistics result
Updated 3 years ago
Potentially a serious issue with Eigenstrat to Plink conversions
Updated 4 years ago2
Different results of outgroup f3 with different versions of qp3Pop
Updated 4 years ago
Best practices for converting plink bed bim fam to geno snp ind
Updated 4 years ago3
Do any of the tools require genetic map distances for accuracy
Closed 4 years ago4
All D-stat values are zero
Updated 4 years ago6
AABB/BBAA sites
Closed 4 years ago1
Feature suggestion (qpGraph): make labels available in .log file
Closed 4 years ago2
Killed error on qpdstat
Closed 4 years ago6
how can I properly get installed admixr into R? error: qpDstat when D
Closed 4 years ago8
Installing openblas on Mac
Closed 4 years ago1
Release archive 6.0 does not build convertf, mergeit nor rollof
Closed 4 years ago1
multiple deffinition of wynn
Updated 4 years ago
fatalx: No samples:
Updated 5 years ago1
fatalx: (ineigenstrat) too many lines in file
Updated 5 years ago2
qpDstats produced strange results for some combination of species
Updated 5 years ago5
Does three population test can provide the direction of gene flow?
Closed 5 years ago2
all individuals set ignore. Likely input problem (col 6)
Updated 5 years ago1
output explanation
Updated 5 years ago1