Art Poon (ArtPoon)

ArtPoon

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Company:@PoonLab

Location:Canada

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Art Poon's repositories

ggfree

ggplot2-style plots with base R graphics

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BioID

Source files for online resources of Bioinformatics of Infectious Diseases course

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kamphir

Phylogenetic inference using a tree-shape kernel in an Approximate Bayesian Computation framework

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gotoh2

Lightweight and customizable Python/C extension for pairwise alignment of genetic sequences using the Gotoh algorithm

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hyphy

HyPhy: Hypothesis testing using Phylogenies

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BelleJS

Generate BEAST XML analysis files using a BEAUTI-like JavaScript interface

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latex-cv

A LaTeX CV with minor tweaks to moderncv template

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preprints

Public access to TeX, scripts and data for manuscripts in preparation

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spacewar-js

JavaScript implementation of the DOS game SpaceWar

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tex-cihr

A LaTeX template for CIHR Project Grant applications

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dynamics-evolution-indico

Indico customization files for dynamicsevolution.org

mathsheets.js

A simple JavaScript/HTML5 web applet for generating basic math exercise sheets

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pixelcraft

JavaScript code for converting video game sprite PNGs to cross-stitch patterns

anchre

Code for the Gates/RSA methods bakeoff

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bioinfo

Assorted collection of bioinformatic scripts

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Covid19Canada

Epidemiological Data from the COVID-19 Outbreak in Canada

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Creative-Commons-Markdown

Markdown-formatted Creative Commons licenses

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iupmBayes

Bayesian estimation of infectious units per million (IUPM) from viral outgrowth assay-based sequence data

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makebst

A small web script (JS and PHP) for interfacing with Patrick Daly's custom-bib package for customizing LaTeX bibliography styles

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netabc

Fitting contact network models to phylogenies with kernel-ABC

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pangolin

Software package for assigning SARS-CoV-2 genome sequences to global lineages.

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sc2rf

SARS-Cov-2 Recombinant Finder for fasta sequences

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sealign

SeALign is an attempt to port Andrew Rambaut's Se-Al alignment editor to HTML5 Canvas and Javascript

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TreeShapeKernel

A kernel function for comparing the shapes of phylogenetic trees.

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