iGEM/UCSD evolutionary biology and bioinformatics group's repositories
phylotree.js
Interactive viewer of phylogenetic trees
hyphy-analyses
HyPhy standalone analyses
datamonkey-js
Datamonkey - Run state-of-the-art statistical models through the comfort of your browser
alignment.js
Javascript alignment viewer
ogv-dating
Scripts and results for estimating the dates of integrated HIV viruses using RNA samples from the same host
hyphy-vision
Visualize HyPhy results in your browser
hivclustering
Infer molecular transmission networks from pairwise distance files (part of HIV-TRACE)
hivtrace-locales
Repository of hivtrace translations
autotune-data
This repository contains datasets utilized in the AUTO-TUNE manuscript for inferring HIV transmission clusters based on genetic distances.
biosampleMeta
Some biosample metadata scraping scripts for the ARGOS project
Language:HyPhy000
Language:JavaScript000
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veg.github.io
Veg pages