ylf9811's repositories
AlignmentOnGPU
A GPU implement of string alignment algorithms.
ASC21-PRESTO
ASC20-21
bioconda-recipes
Conda recipes for the bioconda channel.
bwa-SW9A
Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)
CARE
CARE: Context-Aware Read Error correction for Illumina reads
DailyExercise
Daily exercise for some problems from CSP or codeforeces
htslib-pipe-opt
C library for high-throughput sequencing data formats
IPCCfinal
IPCC2021-final
PAC2021final
PAC2021final--SDUChiFanBuZhangRou
libdeflate_slave
libdeflate block parallel (de)compress on sunway
PAC2022-thundersvm
Highly optimized version of thundersvm using intel oneapi tools
Rabbitbam2fq
Rabbitbam2fq
RabbitQCSTD
A debug version of RabbitQC
RabbitVar-pipe-opt
An Fast variant calling tool to detection germline and somatic variants
ReRabbitQC
ReRabbitQC
samtools-pipe-opt
Tools (written in C using htslib) for manipulating next-generation sequencing data
sleef
SIMD Library for Evaluating Elementary Functions, vectorized libm and DFT
strobealign-0.12.0-timer-check
strobealign-0.12.0, add timer and check version
strobealign-fast
Optimized version of strobealign.