Beast code in Giters

RabbitBio's repositories

RabbitTClust

RabbitTClust: enabling fast clustering analysis of millions bacteria genomes with MinHash sketches

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RabbitQCPlus

A more efficient quality control tool for sequencing data

Language:C++MIT19 5 6

RabbitFX

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RabbitKSSD

RabbitKSSD: accelerating genome distance estimation on modern multi-core architectures

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RabbitV

RabbitV: fast detection of viruses and microorganisms in sequencing data on multi-core architectures

Language:C++MIT8 1 4

RabbitTrim

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RabbitFX-Casestudy

RabbitFX case studies

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RabbitSAlign

GPU Acceleration of Short Read Alignment for Heterogeneous Multicore Platforms

Language:C++MIT100

RabbitSketch

fast sketch for DNA or normal sequence data (MinHash WeightedMinHash OrderMinHash and hyperloglog)

Language:C++NOASSERTION1 10

SWQC

An Efficient Sequencing Data Quality Control Tool on Sunway Platform

Language:C++MIT100

RabbitIO

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RabbitMash

RabbitMash: an efficient highly optimized implementation of Mash.

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RabbitQC

RabbitQC: high-speed scalable quality control for sequencing data.

Language:C++GPL-3.0020

RabbitQC-CCS

A quality control toolset for CCS-BAM files

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RabbitUniq

compute unique k-mer faster

Language:C++MIT02 1

RabbitVar

An Fast variant calling tool to detection germline and somatic variants

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RabbitBM

Highly optimized version of ST_BarcodeMap.

Language:C++MIT020

RabbitFX-1

new

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RabbitZ

Our aim: A streaming gzip decompressing library for biological sequences

Language:C++MIT010