Beast code in Giters

Wolfgang Maier's starred repositories

carbon-lang

Carbon Language's main repository: documents, design, implementation, and related tools. (NOTE: Carbon Language is experimental; see README)

Language:C++NOASSERTION32300 391 590

modern-unix

A collection of modern/faster/saner alternatives to common unix commands.

30347 408 81

typst

A new markup-based typesetting system that is powerful and easy to learn.

Language:RustApache-2.029921 81 2219

python-mastery

Advanced Python Mastery (course by @dabeaz)

Language:PythonCC-BY-SA-4.010479 80 36

makesite

Simple, lightweight, and magic-free static site/blog generator for Python coders

Language:PythonMIT1792 60 16

galaxy

Data intensive science for everyone.

Language:PythonNOASSERTION1345 69 6059

literature-clock

Clock using time quotes from the literature, based on the work of Jaap Meijers

Language:RNOASSERTION592 13 21

training-material

A collection of Galaxy-related training material

Language:HTMLMIT297 52 870

hyphy

HyPhy: Hypothesis testing using Phylogenies

Language:HyPhyNOASSERTION200 23 1315

tools-iuc

Tool Shed repositories maintained by the Intergalactic Utilities Commission

Language:HTMLMIT161 33 1123

matrix-corporal

Matrix Corporal: reconciliator and gateway for a managed Matrix server

Language:GoAGPL-3.0138 11 23

SARS-CoV-2

Ongoing analysis of COVID-19 using Galaxy, BioConda and public research infrastructures

Language:Jupyter NotebookMIT128 33 31

datavzrd

A tool to create visual HTML reports from collections of CSV/TSV tables

Language:RustMIT80 1 73

seek

For finding, sharing and exchanging Data, Models, Simulations and Processes in Science.

Language:RubyBSD-3-Clause74 22 1367

ro-crate-py

Python library for RO-Crate

Language:Jupyter NotebookApache-2.043 37 64

savana

Somatic structural variant caller for long-read data

Language:PythonNOASSERTION30 5 26

ena-upload-cli

ENA upload tool - script your Open Data upload to the European Nucleotide Archive

Language:PythonMIT28 6 32

iwc

Galaxy Workflows maintained by the Intergalactic Workflow Commission

Language:Python27 24 54

segment-liftover

Lifterover copy number segments in whole

Language:PythonMIT23 7 8

ena-cog-uk-wfs

Collection of scripts for automated SARS-CoV-2 genome surveillance.

Language:PythonMIT22 6 2

uncovar

Transparent and robust SARS-CoV-2 variant calling and lineage assignment with comprehensive reporting.

Language:PythonBSD-2-Clause20 3 133

sars-cov-2-processing-requests

Request execution of Galaxy SARS-CoV-2 variation analysis workflows on input data you provide.

Language:PythonMIT18 5 1

primer-schemes

Tiling PCR primer scheme definitions

CC-BY-4.010 5 15

springsuite

Language:PythonGPL-2.09 10

t2t-chm13-chry

Language:Jupyter Notebook9 3 1

shortwave

This not my project, just an old fork. Upstream is here

Language:RustGPL-3.08 20

vapor

Language:PythonGPL-3.06 4 6

covid-sequence-analysis-workflow

Language:ShellApache-2.06 7 1

ptdk

Webserver for Planemo Training Development Kit

Language:PythonMIT4 17 8

awesome-galaxy-histories

A curated list of awesome public Galaxy histories

MIT1 60