cmu-delphi / epiprocess

Tools for basic signal processing in epidemiology

https://cmu-delphi.github.io/epiprocess/

cmu-delphi/epiprocess Issues

Search box on docs site is broken
Updated 18 days ago3
`epi_slide*` no column behavior
Updated 20 days ago5
error messaging: better warning when user doesn't specify column in `epi_slide` `.f`
Updated 20 days ago
Add `lubridate::period` support for `epi_slide_mean` etc
Updated 23 days ago3
discussion: should we keep the geo_type in the epi_df metadata or bring it over to external functions?
Updated a month ago
experimental: try using doctest
Updated a month ago
Allow < 3 args in both `epi_slide` and `epix_slide`
Updated a month ago2
`epi_df` structure
Closed a month ago3
Potential design issue with epix_merge COMPACTIFY
Updated a month ago3
tidyselect warning
Closed 2 months ago3
Consider default `as_factor` conversion for `geo_type`
Updated 2 months ago8
`epi_slide` and `epix_slide` args
Updated 2 months ago3
basic revision analysis stats
Closed 2 months ago
select.epi_df falls back to tibble if geo_value or time_value are removed
Updated 2 months ago
`before=Inf` is bugged in `epi_slide_opt`
Closed 2 months ago
`?epi_df` doesn't pull up help (any more?)
Closed 2 months ago1
Add option to `epix_merge()` or add a separate function to omit epikeytimes where one of the signals didn't exist yet or stopped reporting
Updated 2 months ago
Consider having separate `.ref_time_value` and `.version` in archive slides
Updated 2 months ago
`epix_as_of` working with strings
Updated 2 months ago1
CRAN checklist
Updated 2 months ago
Benchmark `compactify`, improve performance if needed
Updated 2 months ago
Consider "time diff" helpers
Updated 2 months ago
[enh] promote `other_keys`
Updated 2 months ago2
`epix_slide` allows `time_value` and `version` to be different types & do unintended things
Closed 3 months ago3
`epix_slide_ref_time_values_default` misbehaves on datetimes
Closed 3 months ago2
Consider checking whether `guess_period()` result doesn't appear in time diffs
Updated 3 months ago
`as_epi_df` construction conviences
Closed 3 months ago3
`pkgdown` on PRs appears to be deploying to `dev`
Closed 3 months ago2
Consider more robust fixes to check warnings about variable name bindings not being found.
Updated 3 months ago
`epi_archive$other_keys` is empty
Updated 3 months ago2
Future redesign of `epi_slide` and `epix_slide`
Updated 3 months ago3
Type stability cleanup in `epi_archive`
Updated 3 months ago1
Consider moving `epi_shift()` from `epipredict` here, exporting, maybe generalizing
Updated 3 months ago5
`as_epi_df` convienence: combine separate day/month/year columns etc
Updated 3 months ago1
local test failures
Closed 3 months ago2
Do we need `as_tibble()` to drop the class?
Closed 4 months ago
Resolve "... may be used in an incorrect context" check warnings
Closed 4 months ago3
`epi_slide_*` default operating column?
Updated 4 months ago
Don't complain about "compatible" key columns with duplicate names when doing grouped slides
Updated 4 months ago1
Consider allowing `epi_recipe` as input to `epi[x]_slide` or adding other functions to do so
Updated 4 months ago
Add an intuitive `new_col_name` arg to `epi_slide` and `epi_slide_*` fns
Updated 4 months ago
Refactor `epi_slide{,_opt,_mean,_sum}()` examples to `select()` signals at before slide rather than after
Updated 4 months ago
repo: compile list of contributors and add them to the README
Updated 4 months ago
Demonstrate use of new `epi_slide_opt` and derived mean, sum functions in vigettes
Updated 4 months ago
Refactor to use `case_match()` when we're on dplyr 1.1.0
Updated 4 months ago
Add name-validating, non-partial-matching `$`, `$<-`, `[`, `[<-`, `[[`, `[[<-` for `epi_archive`
Updated 5 months ago
[PERF] Make new_epi_archive more unsafe and more efficient and use it in safe places
Updated 5 months ago
Namespace cleanup
Updated 5 months ago
[DOC] Centralize and clarify documentation on mutation, compactification, and other footguns
Updated 5 months ago1
`next_after.integer` is dubious
Updated 5 months ago