WikiPathways's repositories
summit2018
WikiPathways Summit Planning
biopax2json
Convert Biopax OWL (rdf/xml) data to JSON-LD
old-rwikipathways
R client package for the WikiPathways API.
org.wikipathways.client
Java client library for WikiPathways webservice
pathway-finder
Your query list -> WikiPathways results, by means of mapping DBs
fdp-update-script
FDP update script
go-classification
Uses GO-Elite to find over represented GO terms for a pathway based on the genes in the pathway.
gpml-updater
Reads in a GPML file an writes out the newest GPMl version (independent of the GPML version in the file)
kaavio-editor
Editor plugin for kaavio
linux-unattended-installation
This project provides all you need to create an unattended installation of a minimal setup of Linux.
lucene-indexer
Library to create the WP lucene index
mediawiki-extensions-WikiPathways-OntologyTags
Google summer of code 2018 wikipathways
mediawiki-vendor
The vendor repo forked from upstream @ WMF
pvjson2biopax-js
Convert pvjson pathway data format to BioPAX format
pvjson2gpml-js
Convert biological pathway data from pvjson1.0 (json) to GPML 2013a (XML).
wikipathways-issue-tracker
Collecting bug reports / feature requests / etc for WikiPathways
wikipathways-sql-releaser
Library for generating database for WikiPathways data releases