Vincent Noël's repositories
MaBoSS_Course
Material for MaBoSS course organized by PerMedCoE
pb4covid19
PhysiBoSS for COVID19 simulator app for MyBinder/nanoHUB
PhysiCell-Studio
GUI application to build a PhysiCell model
SBGNRenderAPI
A simple SBGN-ML renderering API
libsbml-plus-packages
Conda recipe for libsbml with all packages
PhysiCell
PhysiCell: Scientist end users should use latest release! Bugfixes should be submitted to the development branch.
pyMaBoSS
python interface for the MaBoSS software
coinbrew
COIN-OR build and installation script
colomoto-docker
The CoLoMoTo Interactive Notebook: Accessible and Reproducible Computational Analyses for Qualitative Biological Networks
FromSpeciesToMaBoSSModel_BB
PerMedCoE Building block to build a MaBoSS model from a list of species
intracellular_libs
Repo to host platform-specific libraries for intracellular solvers
MaBoSS-Optim
Optimization of MaBoSS models
MaBoSS-Sampling
Parameter sampling for MaBoSS models
PhysiCOOL
A generalized, model-agnostic framework for model calibration in PhysiCell.
python-scripts
Useful Python scripts related to PhysiCell
staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
UC2Workflow
Use Case 2 Workflow - Drug synergies on cell lines
vincent-noel.github.io
Personal website