PerMedCoE 's repositories
observatory_benchmark
Description of the efforts towards having a comprehensive observatory of tools and their benchmarks
BuildingBlocks
This repository contains all Building Blocks developed within PerMedCoE
covid-19-workflow
COVID-19 multiscale modelling of the virus and patients’ tissue
mpi-in-container
https://permedcoe.github.io/mpi-in-container
2023summerschool-multiscale-material
Learning material for the 2023 PerMedCoE Summer School, June 26-30 at Montanyà, Spain
permedcoe_doc
Permedcoe package documentation
basic_application
Minimal example with one Building Block.
cancer-invasion-workflow
Cancer Invasion Workflow
cluster-tutorial
https://permedcoe.github.io/cluster-tutorial/
hpc-links
https://permedcoe.github.io/hpc-links/
Lysozyme_in_water
Sample application using multiple Building Blocks.
cancer-diagnosis-workflow
PerMedCoE use case 1: Cancer diagnosis based on omics information
EMBOws2023
Repository of files for the EMBO workshop "Computational models of life: From molecular biology to digital twins" in 2023