upendrak

create-llama

The easiest way to get started with LlamaIndex

BatchEffectsPackage

The MBatch R package and Docker image are designed to help assess and correct for batch effects.

llm.c

LLM training in simple, raw C/CUDA

marvin

✨ Build AI interfaces that spark joy

taipy

Turns Data and AI algorithms into production-ready web applications in no time.

miniprot

Align proteins to genomes with splicing and frameshift

degust

An interactive web-tool for RNA-seq analysis

ML-For-Beginners

12 weeks, 26 lessons, 52 quizzes, classic Machine Learning for all

evo

Biological foundation modeling from molecular to genome scale

GeneGPT

Code and data for GeneGPT.

oarfish

long read RNA-seq quantification

biowasm

WebAssembly modules for genomics

aim

Aim 💫 — An easy-to-use & supercharged open-source experiment tracker.

pipeline-call-sSNV

A Nextflow pipeline to identify the somatic single nucleotide variants (sSNVs) by comparing a pair of tumor/normal samples.

tool-NFTest

CLI to automate Nextflow pipeline testing

sdsu-docker-workshop

SDSU Data Science Symposium 2024 - Docker Workshop

pandas-ai

Chat with your database (SQL, CSV, pandas, polars, mongodb, noSQL, etc). PandasAI makes data analysis conversational using LLMs (GPT 3.5 / 4, Anthropic, VertexAI) and RAG.

FriendsDontLetFriends

Friends don't let friends make certain types of data visualization - What are they and why are they bad.

vanna

🤖 Chat with your SQL database 📊. Accurate Text-to-SQL Generation via LLMs using RAG 🔄.

jupyter-ai

A generative AI extension for JupyterLab

MLme

llm-course

Course to get into Large Language Models (LLMs) with roadmaps and Colab notebooks.

bioinformatics

:microscope: Path to a free self-taught education in Bioinformatics!

cv

Print-friendly, minimalist CV page

biogenome-portal

Biogenome data portal

scidataflow

Command line scientific data management tool

generative-ai

Sample code and notebooks for Generative AI on Google Cloud, with Gemini on Vertex AI

lang2sql

A tutorial for setting an SQL code generator with the OpenAI API

ggkegg

Analyzing and visualizing KEGG information using the grammar of graphics

ml-engineering

Machine Learning Engineering Open Book