tsalo

dev-days-2021

Web site for the Nilearn Dev Days, May 2021

gclda

Generalized Correspondence LDA (Python implementation). Deprecated in favor of NiMARE.

pyiva

Implementation of the independent vector analysis (IVA) algorithm using a multivariate Laplace prior

Phase-based_denoising_pipeline

adjusting-dropout-fMRI-meta

Code, spreadsheet and demo data to adjust fixed, random and mixed effects fMRI meta-analysis to account for variable dropout across studies.

convert-eprime

Python functions to convert E-Prime files to csvs. Not currently being developed, but issues and PRs welcome!

metaCurious

autoCV

automatic generation of CV

ica-aroma-org

Repository to prepare the ICA-AROMA tutorial for Brainhack Donostia.

BrainSpace

BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics datasets | available in both Python and Matlab |

exercises

md-tooltips-link

Markdown extension for Python markdown to generate glossary tooltips.

nimare-resources

Scripts to generate downloadable resources for NiMARE

complex-flow

Initial work on a complex-valued fMRI preprocessing workflow.

bids-2-devel

Discussions and suggestions of backwards incompatible changes to BIDS

Onboarding

Resources and activities for new NBC lab members. Inspired by the Whitaker lab's great Onboarding repo.

cis-bidsutils

Miscellaneous functions for working with BIDS datasets

cis-bidsify

Tools for Singularity- and heudiconv-based BIDSification and anonymization of MRI data optimized for the FIU HPC.

cis-processing

Automated transfer, conversion, and processing of data acquired at the FIU Center for Imaging Science.

physutils

Common tools for the physiopy suite

stale

A GitHub App built with Probot that closes abandoned Issues and Pull Requests after a period of inactivity.

ICA-AROMA

ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.

Noise_modeling_based_on_PPG

Modeling of low and high frequency physiological fluctuations in fMRI based on photoplethysmograph (PPG)

FIU-CIS

A repository for documenting the FIU Center for Imaging Science

fiuneuro.github.io

Website for unofficial projects associated with the FIU cognitive neuroscience program.

task_stimuli

psychopy scripts for stimuli presentations

ffmpeg-normalize-docker

ffmpeg

Docker build for FFmpeg on Ubuntu / Alpine / Centos 7 / Scratch

localizer-task

M1/V1/A1 localizer task

pyfLoc

A PsychoPy implementation of the Stanford VPN lab's functional localizer task