Taylor Salo's repositories
afni
Official AFNI source and documentation
aroma
ICA-AROMA, as a Python package
bids-specification
Brain Imaging Data Structure (BIDS) Specification
CuBIDS
Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.
fmripost-aroma
Run ICA-AROMA on fMRIPrep derivatives
fmriprep
fMRIprep is a functional magnetic resonance image pre-processing pipeline that is designed to provide an easily accessible, state-of-the-art interface that is robust to differences in scan acquisition protocols and that requires minimal user input, while providing easily interpretable and comprehensive error and output reporting.
GluBIDS
BIDS-compatible pyGluCEST Pipeline and user-friendly package
heudiconv
little helper to ease DICOM conversion to ready-to-share folder with heuristics
LAYNII
Stand alone fMRI software suite for layer-fMRI analyses.
NBCLab.github.io
Website for the NBC lab
nireports
The NiPreps' Reporting and Visualization system - report templates and "reportlets"
niworkflows
Common workflows for MRI (anatomical, functional, diffusion, etc)
PennLINC.github.io
Documentation for PennLINC
pNet
A toolbox for personalized functional network modeling
qsiprep
Preprocessing and reconstruction of diffusion MRI
ReproBrainChart.github.io
:triangular_ruler: Website for Reproducible Brain Charts Project
smriprep
Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
tsalo.github.io
Personal site
warpkit
Python library for neuroimaging transforms.