tsalo

xDF

xDF estimates variance of Pearson's correlations among highly autocorrelated time series.

misc-notebooks

tsalo_cv

Taylor Salo's LaTeX CV

babs

BIDS-App Bootstrap (BABS)

bids-apps.github.io

Portable neuroimaging pipelines that understand BIDS datasets

bids-methods

Repository for templates to generate methods section descriptions of BIDS datasets

bids-validator

Validator for the Brain Imaging Data Structure

bids-website

Website for the Brain Imaging Data Structure standard.

ExploreASL

ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.mutsaerts@amsterdamumc.nl. Development details can be found under the wiki tab. Code documentation can be found on the documentation website https://exploreasl.github.io/Documentation

freesurfer_tabulate

Gathering/Creating annot files and using them to get tsvs

heudiconv-joss-paper

Repository to prepare HeuDiConv paper

just-the-docs

A modern, high customizable, responsive Jekyll theme for documentation with built-in search.

MARSS

Multiband Artifact Regression in Simultaneous Slices (MARSS)

medic_analysis

Various files and analysis for MEDIC paper

mriqc

Automated Quality Control and visual reports for Quality Assesment of structural (T1w, T2w) and functional MRI of the brain

nipype

Workflows and interfaces for neuroimaging packages

nipype1-examples

Example workflows from Nipype 1.x

patch-denoising

Patch based denoising method, targeting fMRI thermal noise removal.

phys2bids

Python3 library to format physiological files in BIDS. At the moment, it supports Acqknowledge and Labchart.

phys2denoise

A collection of scripts to prepare physiological denoise

pybids-reports

A subpackage of pyBIDS, implementing automatic report generation from BIDS datasets.

PyMARE

PyMARE: Python Meta-Analysis & Regression Engine

python-monorepo-test

An attempted interdependent monorepo.

qMRLab

Quantitative MRI Made Easy with qMRLab: MRI software for data Simulation, analysis and visualization

resampler

Single-shot resampling utility for nipreps derivatives

sacf

S-ACF: A selective estimator for the autocorrelation function of irregularly sampled time series

spatiotemp_dev_plasticity

templateflow

The TemplateFlow Archive - A DataLad super-dataset

tsalo

I am Taylor Salo.

xcp_d-examples

Examples of advanced use-cases for xcp_d.