whole-cell-modeling

There are 0 repository under whole-cell-modeling topic.

• KarrLab / wc_lang

  Language for describing whole-cell models as reaction networks

  whole-cell-modelingsystems-biologycomputational-biologycell-biologymodelingsimulation
  Language:Python 9

• KarrLab / wc_rules

  Rule-based modeling for whole-cell models.

  systems-biologycell-biologykinetic-modelingrule-based-modelingwhole-cell-modeling
  Language:Python 9

• KarrLab / wc_model_gen

  Framework for systematically and scalably designing whole-cell models from large datasets

  whole-cell-modelingsystems-biologycomputational-biologycell-biologydynamical-modeling
  Language:Python 5

• KarrLab / wc_kb

  Tools for building databases of experimental data for constructing whole-cell models

  whole-cell-modelingsystems-biologygenomicsbioinformaticscell-biologymolecular-biologydata-aggregationdata-integration
  Language:Python 3

• SysBioInra / rbatools

  Programming interface to resource allocation modelling with the Resource Balance Analysis (RBA) method. This is version 1.0.3

  bioinformaticsbiotechnologymodelingpythonresource-allocationsimulationsystems-biologywhole-cell-modelinggenome-scale-modelsconstraint-based-modeling
  Language:Python 2

• KarrLab / wc_analysis

  Tools for analyzing whole-cell knowledge bases, models, and simulation results

  whole-cell-modelingsystems-biologycomputational-biologysimulationvisualization
  Language:Python 1

• KarrLab / wc_onto

  Ontology for whole-cell modeling

  whole-cell-modelingsystems-biologycomputational-biologysingle-cellbioinformaticsontology
  Language:Python 1

• KarrLab / karr_lab_code

  Code for the Karr Lab's code website

  whole-cell-modeling
  Language:PHP

• KarrLab / karr_lab_docs

  Code for the Karr Lab docs website

  whole-cell-modelingdocumentation
  Language:PHP

• KarrLab / wc_env_manager

  Tools for managing computing environments for WC modeling

  whole-cell-modelinginstallationdependenciesdocker
  Language:Python