srna

There are 0 repository under srna topic.

• gitHBDX / TransfoRNA

  TransfoRNA: Navigating the Uncertainties of Small RNA Annotation with an Adaptive Machine Learning Strategy

  bioinformaticslanguage-modelmirnangs-analysisrnasrnatransformer
  Language:Python 21

• forestbiotech-lab / miRPursuit

  Analysis workflow for smallRNA sequenced data

  srnapipelinernaplantnucleic-acids
  Language:Shell 4

• Vicky-Hunt-Lab / HuntLab-smallRNA

  Pipeline to carry out tasks common in the Hunt Lab on small RNA data

  bioinformaticssrnasrna-seq
  Language:Python 4
• stepRNA

  Vicky-Hunt-Lab / stepRNA

  Align short RNA seqeuncing reads to determine the length of of overhang

  bowtie2dicernucleic-acidsrnarna-seqsrna
  Language:Python 4

• marromesc / miRPIPE

  Simple scripts to parallelize miRNA analysis with sRNAtoolbox performed for my Master thesis.

  biomarkerscancerdifferential-expressionhumanliquid-biopsymirnasrna
  Language:Shell 2

• zajakin / sRNAflow

  sRNAflow – a tool for analysis of small RNA-seq data

  rshinynextflowngsrna-seqsrna
  Language:R 2

• amara707 / SilentGuardians-RNAi

  This is my final year project, where I used bioinfomatics tools to characterize RNA silencing for plant viruses in monocots.

  plant-diseaseplant-disease-detectionplant-virusessrnarna-silencingbioinformaticsbioinformatics-pipeline
  Language:Shell 1

• mzytnicki / srnadiff

  rna-seq-analysissrnadifferential-expression
  Language:R 1

• biga94 / sRNA-target-prediction

  MD thesis' project, where I performed an In silico target prediction for small ncRNAs in Mycobacterium tuberculosis

  ncrnasrnasrna-seqtarget-prediction
  Language:R 0

• m1ma0314 / CSE185Group16_TeeSnee

  TeeSnee is an algorithm designed to take high-dimensional gene expression data and represent it in low-dimensional space.

  anndatabioinformaticsdatadata-visualizationpythonscanpysrnat-sne
  Language:Jupyter Notebook 0

• Swart-lab / loxodes-srna-workflow

  small RNA library processing and analysis

  snakemake-workflowsrnaloxodes
  Language:Python