rare-cells

There are 0 repository under rare-cells topic.

• ScialdoneLab / CIARA

  CIARA (Cluster Independent Algorithm for the identification of markers of RAre cell types) is an R package that identifies potential markers of rare cell types looking at genes whose expression is confined in small regions of the expression space

  bioinformatics-analysiscluster-analysisfeature-selectionopen-sourcerare-cellsrstats-package
  Language:R 15

• fabotao / GapClust

  Rare cells detection using gap information between minor cluster and neighboring clusters

  rare-cellscluster
  Language:R 7

• jr-leary7 / SCISSORS

  SCISSORS builds upon the Louvain graph-based clustering in Seurat by optimizing parameter selection when reclustering cell groups, with an eye towards identifying rare cell types.

  cell-type-identificationclusterrare-cellsseuratsubpopulation
  Language:R 7

• scrab017 / RarPG

  A scalable unsupervised learning of scRNAseq data detects rare cells through integration of structure-preserving embedding, clustering and outlier detection

  clusteringrare-cellssingle-cell-rna-seqoutliers-detection
  Language:Jupyter Notebook 0