Jack Leary's repositories
SurveyQuantReg
This repo contains an R package built to analyze NHANES survey data using quantile regression.
awesome-single-cell
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
bash
Next generation sequencing pipelines that I've written.
quarto-site
My personal website
scLANE-Revision
code and data relating to the scLANE revision
PHC-6063-Modeling
Machine learning models for diabetes diagnoses
PHC-6088-Project
My PHC 6088 project for my MS program at UF.
PHC-6937-Project
My final project for PHC 6937 (Data Visualization) for my Biostatistics MS at UF.
python
My Python code. I used to hate Python, but recently I've been enjoying it more!
scanpy
Single-Cell Analysis in Python. Scales to >1M cells.
SCISSORS-Analyses
Analyses relating to the Yeh Lab's `SCISSORS` project
SCISSORS-Sims
Simulation study for SCISSORS
scLANE-Paper
analyses for the manuscript detailing `scLANE`
scLANE-Sims
Simulation studies for scLANE
scLANE-Simulations
Simulation study for the scLANE manuscript
StatisticalRethinking
Working through McElreath's book on Bayesian statistics with R, Statistical Rethinking.