oluwadare-lab

There are 1 repository under oluwadare-lab topic.

OluwadareLab / HiC-GNN
A Generalizable Model for 3D Chromosome Reconstruction Using Graph Convolutional Neural Networks
deep-learning hi-c 3d-reconstruction graph-neural-networks graph-convolutional-networks 3d-modelling oluwadare-lab
Language:Python 9
OluwadareLab / HiCARN
HiCARN: Resolution Enhancement of Hi-C Data Using Cascading Residual Networks
deep-learning hi-c super-resolution genome-analysis machine-learning enhancement oluwadare-lab
Language:Python 4
OluwadareLab / ParticleChromo3D
Using Particle Swarm Algorithm for chromosome three-dimensional structure construction
3d-genome 3d-reconstruction particle-swarm-optimization oluwadare-lab
Language:Jupyter Notebook 3
OluwadareLab / ParticleChromo3D_Plus
A Web-Server implementation of ParticleChromo3D for 3D chromosome structure reconstruction
3d-genome 3d-reconstruction oluwadare-lab pso-algorithm
Language:Python 3
OluwadareLab / DeepSplicer
DeepSplicer
machine-learning deep-learning deep-convolutional-neural-networks splice-site dna-sequences oluwadare-lab
Language:Python 2
OluwadareLab / EnsembleSplice
Ensemble Deep Learning for Splice Site Prediction
convolutional-neural-networks deep-learning deep-neural-networks machine-learning rna-seq-analysis splice-site oluwadare-lab
Language:PureBasic 2
OluwadareLab / TADMaster
TADMaster: A Comprehensive Web-based Tool For Analysis of Topologically Associated Domains
hi-c tads topological-domains oluwadare-lab visualization
Language:Python 2
OluwadareLab / CBCR
CBCR: A Curriculum Based Strategy For Chromosome Reconstruction
hi-c 3d-modeling 3d-reconstruction machine-learning curriculum-learning optimization-algorithms 3d-genome oluwadare-lab
Language:MATLAB 1
OluwadareLab / ChromeBat
ChromeBat: A Bio-Inspired Approach to 3D Genome Reconstruction
bat-algorithm optimization-algorithms 3d-models 3d-modelling 3d-reconstuction 3d-genome oluwadare-lab
Language:Python 0