There are 2 repositories under nonequilibrium-physics topic.
Tutorial for the usage of the dcTMD approach and Langevin simulations employing the trypsin-benzamidine complex as example.
Code developed for a research project at the University of British Columbia focusing on a simple model of active particles, supervised by Jörg Rottler.
Python scripts for the application of dissipation-corrected targeted molecular dynamics analysis.
The code for quantifying cell differentiation&reprogramming landscape-flux from single-cell transcriptomics
Official PyTorch implementation of "Estimating entropy production in a stochastic system with odd-parity variables".
Official PyTorch implementation of "Deep reinforcement learning for feedback control in a collective flashing ratchet" (PRR 2021).
Wiki of a research project at the University of Cambridge, supervised by Robert Jack, and at the Université de Paris, supervised by Frédéric van Wijland.
Dev repo for PoWr refactoring
Wiki of a research project at the University of British Columbia focusing on a simple model of active particles, supervised by Jörg Rottler.