mhc-binding-prediction

There are 2 repositories under mhc-binding-prediction topic.

nf-core / epitopeprediction
A bioinformatics best-practice analysis pipeline for epitope prediction and annotation
nf-core nextflow workflow pipeline epitope epitope-prediction mhc-binding-prediction
Language:Nextflow 39
GfellerLab / MixMHC2pred
HLA-II ligand predictor.
hla mhc-binding-prediction t-cell
Language:C++ 33
artyomovlab / hmmhc
MHC class II binding prediction
bioinformatics-tool mhc-binding-prediction hidden-markov-model
Language:Python 13
nstrodt / USMPep
Major Histocompatibility Complex (MHC) Binding Affinity Prediction
machine-learning deep-learning peptides mhc-binding-prediction
Language:Python 8
DABAKER165 / pepMeld
Peptide Microarray Workflow. Python, open-source
peptide-sequencing immune-system antibodies epitope-discovery instrumentation mhc-binding-prediction
Language:Python 4
ryanquinnnelson / CMU-02750-Peptide-Design-using-Bayesian-Optimization
Spring 2021 - Automation of Scientific Research - course project
gaussian-processes active-learning mhc-binding-prediction bayesian-optimization random-forest modal
Language:Jupyter Notebook 2
stefs304 / mhclovac
MHC binding prediction based on modeled physicochemical properties of peptides
mhc-binding-prediction physicochemical-properties
Language:Python 2
TRON-Bioinformatics / omicron-analysis
Analysis code, data and figures on the omicron MHC binding paper
sars-cov-2 preprint omicron mhc-binding-prediction
Language:Jupyter Notebook 2
raghavagps / hlancpred
A method for predicting promiscuous non-classical HLA binding sites in an antigen
hla machine-learning-algorithms mhc-binding-prediction non-classical promiscuous
Language:Python 1
JohanYe / MHC
Repository experimenting with predicting binding affinities inspired by DeepLigand
prediction mhc-binding-prediction python pytorch deep-learning residual-networks lstm-neural-networks lstm rezero
Language:Python 0
ryanquinnnelson / CMU-02718-SARS-CoV2-Vaccine-Design
Fall 2020 - Computational Medicine - course project
sars-cov-2 vaccine-design spike-glycoprotein machine-learning random-forest-regression peptides mhc-binding-prediction
Language:Jupyter Notebook