genome-scale

There are 0 repository under genome-scale topic.

• cdanielmachado / carveme

  CarveMe: genome-scale metabolic model reconstruction

  genome-scalemetabolismmodelingpythonreconstruction
  Language:Python 155

• MetExplore / miom

  Constraint-based modeling of metabolism using Mixed Integer Optimization

  pythonmetabolismmodelingreconstructiongenome-scaleoptimizationcobrapyflux-balance-analysisconstraint-based-modelingmilp
  Language:Python 11

• findCP / findCPcli

  findCP CLI package - find ChokePoint reactions in genome-scale metabolic models

  metabolic-modelsmetabolic-networkchokepointsbmlcobrapymodellingmetabolismgenome-scaledead-endfva
  Language:Python 3

• zimmmermann-kogadeeva-group / GEMsembler

  GEMsembler tool for assembling and comparing several types of Genome-Scale Metabolic Models (GEMs)

  gemsgenome-scale-metabolic-modelcobragenome-scalemetabolismmodeling
  Language:Python 3