telatin

Andrea Telatin's repositories

covtobed

⛰ covtobed | Convert the coverage track from a BAM file into a BED file

Language:C++MIT43 1 12

gan

📜 the Great Automatic Nomenclator — The Next Million Names for Archaea and Bacteria

Language:PythonGPL-3.034 1 1

porfast

⚡pORFast - Paired-end ORF Fast extraction

Language:NimApache-2.06 10

nim-stuff

Exploring NIM

Language:NimGPL-3.03 1 1

FASTX-Abi

Perl module to convert Sanger traces (chromatograms) to FASTQ

Language:Perl2 10

Awesome-Bioinformatics

A curated list of awesome Bioinformatics libraries and software.

100

factotus

The OTUs Factotum

GPL-3.01 10

Acme-Bioconda

Bioconda packages information in Perl

000

ampliquid

Deep quality check of amplicon datasets

MIT010

biofu

Language:PythonMIT010

Captus

Assembly of Phylogenomic Datasets from High-Throughput Sequencing data

GPL-3.0000

docker-files

Docker files linked to Docker Hub builds

Language:Dockerfile010

gannt

Language:PythonAGPL-3.0020

gmh-workshops

Bioinformatics training - Gut Microbes and Health program at the Quadram Institute Bioscience

000

MetaPhage

Language:PythonGPL-3.0000

mf-docs

MetaPhage documentation draft

000

mmbdtp

website for the bioinformatics training

Language:HTMLMIT000

nanoseq

Nanopore demultiplexing, QC and alignment pipeline

Language:NextflowMIT000

nf-channel-error

Language:Nextflow000

nft

nextflow fungible template

GPL-2.0000

OCMS_16S

Language:JavaScriptMIT000

pystuff

Misc Python3 scripts

Language:Python010

sepia

taxonomic classifier based on the kraken2 algorithms and more

Language:RustGPL-3.0000

seqfu2-stats

000

sequence-formats

Language:PerlGPL-3.0000

squid

MIT010

telatin.github.plong

Setup a simple new indieweb site on a domain name in mere minutes with this project.

Language:HTMLMIT000

test-pyfastx

Language:DockerfileGPL-3.0010

VirSorter2

customizable pipeline to identify viral sequences from (meta)genomic data

Language:PythonGPL-2.0000

wordle-it

Italian version of Wordle

Language:JavaScript000