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tdayris-perso / bam-msisensor

Detect replication slippage variants at microsatellite regions

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bioinformatics-pipelinesnakemake-workflowsreproducible-workflowsmicrosatellite-instability

Snakemake workflow: bam-msisensor

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This is a Snakemake workflow for microsatellite instability detection in bam files, powered by MSISensor.

Each tool belong to their authors.

See [wiki] for more information.

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Detect replication slippage variants at microsatellite regions

bioinformatics-pipelinesnakemake-workflowsreproducible-workflowsmicrosatellite-instability

License:GNU General Public License v3.0

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Language:Python 89.1%Language:Makefile 9.8%Language:Shell 1.1%