Chence Shi (shichence)

shichence

Geek Repo

Company:Montreal Institute for Learning Algorithms (Mila)

Location:Zhejiang

Home Page:chenceshi.com

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Chence Shi's starred repositories

openai-cookbook

Examples and guides for using the OpenAI API

segment-anything

The repository provides code for running inference with the SegmentAnything Model (SAM), links for downloading the trained model checkpoints, and example notebooks that show how to use the model.

Language:Jupyter NotebookLicense:Apache-2.0Stargazers:44682Issues:294Issues:641

ChineseBQB

🇨🇳 Chinese sticker pack,More joy / 表情包的博物馆, Github最有毒的仓库, 中国表情包大集合, 聚欢乐~

shap-e

Generate 3D objects conditioned on text or images

Language:PythonLicense:MITStargazers:11370Issues:238Issues:109

gemma_pytorch

The official PyTorch implementation of Google's Gemma models

Language:PythonLicense:Apache-2.0Stargazers:5077Issues:39Issues:34
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BMTools

Tool Learning for Big Models, Open-Source Solutions of ChatGPT-Plugins

Language:PythonLicense:Apache-2.0Stargazers:2851Issues:35Issues:37

RFdiffusion

Code for running RFdiffusion

Language:PythonLicense:NOASSERTIONStargazers:1510Issues:40Issues:169

DiffDock

Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking

Language:PythonLicense:MITStargazers:952Issues:17Issues:197

Poisson_flow

Code for NeurIPS 2022 Paper, "Poisson Flow Generative Models" (PFGM)

Language:PythonLicense:Apache-2.0Stargazers:838Issues:19Issues:13

chroma

A generative model for programmable protein design

Language:PythonLicense:Apache-2.0Stargazers:613Issues:7Issues:46

progen

Official release of the ProGen models

Language:PythonLicense:BSD-3-ClauseStargazers:574Issues:19Issues:43
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OmegaFold

OmegaFold Release Code

Language:PythonLicense:Apache-2.0Stargazers:526Issues:14Issues:57

alphaflow

AlphaFold Meets Flow Matching for Generating Protein Ensembles

Language:PythonLicense:MITStargazers:261Issues:3Issues:14

OpenComplex

Trainable PyTorch framework for developing protein, RNA and complex models.

Language:PythonLicense:Apache-2.0Stargazers:243Issues:17Issues:0

rf_diffusion_all_atom

Public RFDiffusionAA repo

Language:PythonLicense:NOASSERTIONStargazers:231Issues:7Issues:14

diffab

✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)

Language:PythonLicense:Apache-2.0Stargazers:230Issues:4Issues:26

DiffDock-PP

Implementation of DiffDock-PP: Rigid Protein-Protein Docking with Diffusion Models in PyTorch (ICLR 2023 - MLDD Workshop)

EigenFold

EigenFold: Generative Protein Structure Prediction with Diffusion Models

Language:Jupyter NotebookLicense:MITStargazers:158Issues:7Issues:2

genie

De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds

Language:PythonLicense:Apache-2.0Stargazers:152Issues:6Issues:3

TankBind

Open source code for TankBind. Galixir Tenchnologies

Language:PythonLicense:MITStargazers:145Issues:7Issues:28
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BEND

Benchmarking DNA Language Models on Biologically Meaningful Tasks

Language:PythonLicense:BSD-3-ClauseStargazers:72Issues:4Issues:16
Language:PythonLicense:Apache-2.0Stargazers:69Issues:7Issues:10

GECKO

Toolbox for including enzyme constraints on a genome-scale model.

Language:MATLABLicense:MITStargazers:63Issues:12Issues:134

DeepRefine

A geometric deep learning method for refining and assessing protein complex structures.

Language:PythonLicense:GPL-3.0Stargazers:15Issues:2Issues:3