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HeliXonProtein
/
OmegaFold
OmegaFold Release Code
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13
Issues:
58
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78
HeliXonProtein/OmegaFold Issues
OmegaFold weights for Mac / apple silicon
Updated
3 months ago
Exception: Python 3.11.4 (tags/v3.11.4:d2340ef, Jun 7 2023, 05:45:37) [MSC v.1934 64 bit (AMD64)] is not supported.
Updated
3 months ago
Comments count
5
Difference between model 1 and 2
Updated
3 months ago
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2
Google collab error
Updated
6 months ago
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6
Where can I find the confidence value of a Prediction on Omegafold ?
Updated
8 months ago
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2
Next Omegafold
Updated
10 months ago
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3
Geoformer implementation is different from EdgeAttention described in paper
Updated
a year ago
Will there be OmegaFold_Multimer?
Updated
a year ago
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4
Exporting model to ONNX format
Updated
a year ago
Model 2 error
Updated
a year ago
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1
Model 2 subbatch_size not working
Updated
a year ago
Comments count
3
ModuleNotFoundError: No module named 'torch'
Updated
a year ago
CUDA error: unknown error
Updated
a year ago
Why does the edges produced in OmegaPLM become shape (PLM_layers, n , n) instead of (Layers, batch size, n , n)
Updated
2 years ago
Broken prolines ?
Updated
2 years ago
Issues with running model2
Updated
2 years ago
Comments count
1
OmegaFold - Masking specific residues in input FASTA?
Updated
2 years ago
Can omegaFold be used to predict the composite structure of the heavy and light chains of the antibody
Updated
2 years ago
OmegaPLM
Updated
2 years ago
Comments count
2
Confidence metric
Closed
2 years ago
Comments count
4
About the possibility of creating decoys (low quality models)
Updated
2 years ago
2nd model release - is 7KPJ part of the train set in this model ?
Updated
2 years ago
where is 3DPorjection function implemented in the ./decoder/StructureModule?
Updated
2 years ago
A100 VS A40 performance issue
Updated
2 years ago
Comments count
2
OSError: libcudnn.so.8: cannot open shared object file: No such file or directory
Updated
2 years ago
libcupti.so.11.2: cannot open shared object file
Updated
2 years ago
SubBatching
Updated
2 years ago
Parameters Initialization
Updated
2 years ago
When running on https://biolib.com/protein-tools/omegafold/ with a fasta file, this error showed up
Closed
2 years ago
Comments count
1
In-Place Softmax Breaks AutoDiff
Closed
2 years ago
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5
output x best models
Updated
2 years ago
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1
Training Code Availability
Closed
2 years ago
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1
OOM issue when working with gradient
Updated
2 years ago
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1
Some questions about model training
Updated
2 years ago
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1
'Unsupported datatype for constant' when trying to run on a M1 Pro
Updated
2 years ago
Comments count
5
Reproducing Antibodies/Orphans results
Updated
2 years ago
Help with Install
Closed
2 years ago
device option
Updated
2 years ago
Comments count
1
Training code
Closed
2 years ago
Comments count
1
RuntimeError: CUDA out of memory.
Closed
2 years ago
Comments count
1
pseudo MSAs in OmegaPLM
Closed
2 years ago
Comments count
1
output plddt?
Closed
2 years ago
Comments count
1
Installing OmegaFold in Ubuntu v22.04
Updated
2 years ago
Comments count
3
Motif & sub-sequence masking
Updated
2 years ago
Reproducing CASP results
Updated
2 years ago
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1
License for weight parameter file
Updated
2 years ago
Out of memory for the training of 1 layer of GeometricAttention
Updated
2 years ago
Error when running inference on CPU
Closed
2 years ago
Comments count
2
Error: buffer is not large enough. in Apple M2
Updated
2 years ago
Comments count
3
About the AtomEmbedder
Updated
2 years ago
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