Stelios Sfakianakis's repositories
BME-Medical-Informatics-course
Examples and material for the BME Medical Informatics course
oboparse.py
Parses the OBO format in python
saml20-clj
A Clojure SAML 2.0 library for SSO
subnet_stacking
Supporting material for the paper "Stacking of Network Based Classifiers with Application in Breast Cancer Classification" presented in XIV Mediterranean Conference on Medical and Biological Engineering and Computing (2016)
data_int_ctc
The code of our multi-platform data integration work for the identification of biomarkers related to Circulating Tumor Cells (CTCs)
Beyond-LeetCode-SQL
Analysis of SQL Leetcode and classic interview questions. Common pitfalls, anti-patterns and handy tricks are discussed. Sample databases are provided.
cwl-progress-cgi
A CGI for getting the status of a workflow execution in Cromwell
express
Fast, unopinionated, minimalist web framework for node.
FHIR-from-Jupyter
For use with FHIR Dev Days 2020
mha-clinica-api
A RESTful API for retrieving clinical data in the MyHealthAvatar platform
oncopmnetUploader
A plugin for Torrent Suiteᵀᴹ that supports the upload of Ion Torrent data (BAM files) to an S3 object store
prefect-gitlab
A Prefect collection for working with GitLab repositories.
procancer-i-aai
OpenID Connect Relying Party (OIDC RP) using the ELIXIR-AAI for the ProCancer-I platform
reactor-core
Non-Blocking Reactive Foundation for the JVM
sgsfak.github.io
Stelios Sfakianakis website
TS
Torrent Suite
TS-old
Torrent Suite
TumorML-schema
TumorML is an XML-based language for cancer models and respositories.