Please see buildTools/BUILD.txt for build requirements and instructions.
Note especially the section BUILD SPECIFIC MODULES.
To build Analysis module, the command is:
MODULES=Analysis ./buildTools/build.sh
Tips:
- If you are building this software for the first time, it's suggested to use
a Docker container to build. That will reduce the chance of being blocked by
any environment dependencies.
https://hub.docker.com/r/iontorrent/tsbuild/
- Note that the code that was formerly in the ion-alignment and tmap packages is now
rolled into the ion-analysis packages
- For standalone Torrent Variant Caller, please see the below link for instructions.
There are supported Docker containers for various platform.
http://updates.iontorrent.com/tvc_standalone/README.txt
https://hub.docker.com/r/iontorrent/tvcbuild/