sgsfak / BME-Medical-Informatics-course

Examples and material for the BME Medical Informatics course

BME Medical Informatics course - Examples

Contents

• In the covid_xml folder you can find a Python notebook parsing XML (and JSON) COVID-19 data as an example on different data formats
• In the dicom folder there is another notebook showing the use of pydicom and pynetdicom for managing the DICOM medical image format and the corresponding communication protocol.

To use these notebooks you can either clone this repo and use the Python local installation on your machine, or press the "Binder" button shown above to run it online in Binder. You can also open them in Google Colab:

• covid_xml
• dicom

Authors

• Stelios Sfakianakis
• Vaggelis Sakkalis