sebastientourbier

Sébastien Tourbier's repositories

bids-specification

Brain Imaging Data Structure (BIDS) Specification

Language:PythonCC-BY-4.01 10

templates

Document templates for open-source projects (README, CONTRIBUTING, GitHub templates)

Language:GroovyMIT100

tutorial_carbonfootprint_neuropipelines

Language:Jupyter NotebookApache-2.01 10

codecarbon

Track emissions from Compute and recommend ways to reduce their impact on the environment.

Language:PythonMIT000

Connectome Mapper 3 is a BIDS App that implements full anatomical, diffusion, and resting/state functional MRI processing pipelines, from raw T1 / DWI / BOLD data to multi-resolution brain parcellation with corresponding connection matrices.

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containers

Containers "distribution" for reproducible neuroimaging

Language:RoffApache-2.0000

datalad-ds-sample

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DataQualityControlTool

Data Profiler Tool for the Human Brain Project MIP Local Layer.

Language:PythonApache-2.0000

dicomserverci

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dmriprep

dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.

Language:PythonApache-2.0010

docker-elk

Language:ShellMIT010

EddyMotionCorrection

Open-source eddy-current and head-motion correction for dMRI.

Language:PythonApache-2.0010

lesson-example

Example lesson using The Carpentries lesson template.

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mialsuperresolutiontoolkit-1

The Medical Image Analysis Laboratory Super-Resolution ToolKit (MIALSRTK) consists of a set of C++ and Python processing and workflow tools necessary to perform motion-robust super-resolution fetal MRI reconstruction in the BIDS Apps framework.

Language:C++BSD-3-Clause010