Connectomics Lab's repositories
connectomemapper3
Connectome Mapper 3 is a BIDS App that implements full anatomical, diffusion, resting/state functional MRI, and recently EEG processing pipelines, from raw T1 / DWI / BOLD , and preprocessed EEG data to multi-resolution brain parcellation with corresponding connection matrices.
Aneurysm_Detection
This repository contains the code used for the paper "Towards automated brain aneurysm detection in TOF-MRA: open data, weak labels, and anatomical knowledge "
hcp-behavioral-domains
This is the repository to store the analysis code for the paper "Exploring the Latent Structure of Behavior Using the Human Connectome Project’s Data".
CMTKLIB-data
Datalad dataset that stores all data resources of the cmtklib module of Connectome Mapper 3 (https://github.com/connectomicslab/connectomemapper3).
connectome_spectral_analysis
Repository for paper https://authors.elsevier.com/sd/article/S1053-8119(21)00884-3
clabtoolkit
This repository contains a python package that includes useful tools for image processing.
cmp3-ohbm2020
Repo dedicated to resources for presenting connectome mapper 3 at OHBM 2020 Virtual Meeting
Glioma_NLP
This repository contains the code used for the paper:"Diagnostic surveillance of high-grade gliomas: towards automated change detection using radiology report classification"
indivbrainparcel
Python package to parcellate the human brain using the Lausanne multi-scale cortical atlas and the thalamic nuclei atlas developed in the Connectomics and MIAL labs respectively