Sean Anderson's repositories
sdmTMB-paper
Paper describing the sdmTMB R package
seananderson.ca
Hugo backend to my personal site, CV, and blog
RTMB-TESA-spatial
Exercises for a workshop on geostatistical modelling with RTMB + GMRFs
bayes-course
An introduction to Bayesian data analysis with Stan (a work in progress)
pbs-mapping
R package PBSmapping - Mapping fisheries data and spatial analysis tools
pbs-modelling
R package PBSmodelling - GUI tools made easy: interact with models and explore data
ggeffects
Estimated Marginal Means and Marginal Effects from Regression Models for ggplot2
glmmfields
R package for Bayesian spatial and spatiotemporal GLMMs with possible extremes
censored-nb2
Explorations with a censored NB2 distribution for hook competition
ggsidekick
Helper function(s) for ggplot2. [Only theme_sleek() for now.]
pbsEDM
An R package to implement empirical dynamic modelling (EDM) methods
sdmTMB-manual
sdmTMB manual
Censored_Longline_RCode
A repository storing all the R code used to run the simulation experiments and case study seen in the paper: *A statistical censoring approach accounts for hook competition in abundance indices from longline surveys*
glmm-course
Workshop exercises on regression, GLMs, mixed-effects models, and GLMMs in R
pbs-data
R package PBSdata - Data, boundaries, and key codes for PBS packages
VAST
Spatio-temporal analysis of univariate or multivariate data, e.g., standardizing data for multiple species or stages
knausj_talon
Config for Talon (beta) for Mac, Windows, and Linux (work in progress)
2021_FISH6004LAB
Lecture notes and materials for the Overview of Statistical Stock Assessment FISH6004 Lab at the Marine Institute of Memorial University
glmmTMB
glmmTMB
stspsize
State space size model
ecology-trends
Analysis for a paper on trends in ecology and conservation through 8 decades