sbresnahan / Galbraith-2016-PNAS-ASE-replication

Replicating the bioinformatics and statistics pipelines for allele-specific expression analysis of ovary tissue from sterile and reproductive reciprocally crossed honey bees as described in Galbraith et al. (2016). PNAS. https://www.pnas.org/content/113/4/1020

Replication: Testing the Kinship Theory of Intragenomic Conflict in Honey Bees

Replicating pipelines for allele-specific expression analysis of ovary tissue from F2 honey bees of F1 reciprocal crosses as described in Galbraith et al. (2016). PNAS. https://www.pnas.org/content/113/4/1020

Bioinformatics: allele-specific read counts

https://github.com/sbresnahan/Galbraith_2016_PNAS_ASE_replication/blob/main/ASE_bioinfo.md

Statistics: parent-specific gene expression

https://sbresnahan.github.io/Galbraith-2016-PNAS-ASE-replication/