savvas-paragkamian

network_science_workshop

Here you can find material for the workshop on network science and its applications in biology and medicine taught in MSc on Bioinformatics, University of Crete

phd-dissertation

.vim

arthropods_assessment_crete

Analysis of Arthropoda data of Crete curated by NHMC

.tmux

My configurations for tmux

bacillus

crete-data-integration

Towards a Crete Soil System warehouse

crete_soil_microbiome

This repository contains scripts for the analysis of the Island Sampling Day of Crete 2016, a project of the soil microbiome.

deco

This repository contains exemplary workflow using programming tools and libraries for data rescue of historical biodiversity data. These tools combine OCR and text mining approaches to retrieve valuable information like species, functional traits and environments.

emodnet-traits

Part of the feasibility study for marine species traits identification with text mining

esecrete

Minimal Mistakes GitHub Pages site starter

crete_isd_paper

historical-marine-literature

Here we investigate the volume of historical marine literature that is digitised and / or curated

label_reconciliations

Code for reconciling multiple transcriptions for a label

mac_scripting

menzerath_altmann_law_gene_families

This the code of my bachelor thesis with the CG2 lab in the university of Crete.

networktutorials

Repository for presentations and network inference tutorials

pema

PEMA: a flexible Pipeline for Environmental DNA Metabarcoding Analysis of the 16S/18S rRNA, ITS and COI marker genes

protein_essentiality_Drosophila_signed_network

unonoctium_website

personal website https://unonoctium.gr