Samuel Lampa's repositories
CDE
CDE: Code, Data, and Environment packaging for Linux
biological_id_conversion
Collection of scripts for doing ID conversions of Biological stuff like Gene IDs etc.
drmaa_python_test
Testing out the basics with DRMAA, with the python bindnings, at UPPMAX
sbatch_config
Command-line SBATCH Script Configuration Wizard
chemicalname-to-inchi
Do Chemical name to Inchi conversion using the Chemical Translation Service
gringo
High-performance minimalist queue implemented using a stripped-down lock-free ringbuffer, written in Go (golang.org)
drawler
A web crawler written in D, to feed a MySQL database, for easy connection to Sphinx indexer.
geany-colorscheme
My favourite geany color scheme
savelinkstoxls
Simple Python script to save links from an URL into an Excel file
galaxy_semwebtools
Import data into Galaxy by using a querying an (external) SPARQL endpoint
argo
RDF library written in Go
dddscript
Domain Driven Design inspired approach to python scripting
getter-and-setter-generator
Getter and Setter generator - Generates corresponding methods based on existing variable names. Variable name to be autogeneratoedmust follow the naming convention "$mVariableName" where "$m" tells the generator which variable to have a get or set-method.
galaxy-toolconfig-bnf
EBNF Grammar for generating an ANTLR parser for the Galaxy ToolConfig CLI Tool wrapper format
bioclipse.igv
Integration of the Integrative Genomics Viewer (IGV) in Bioclipse
bioclipse.docpublish
Eclipse Plug-In with Ant Tasks for publishing developer documentation as Eclipse help files as well as to MediaWiki
bioclipse.smw
Semantic MediaWiki connector for Bioclipse
phpsnippets.fastaformatter
A little PHP script to format FASTA Protein sequences nicely
pyke
Python Knowledge Engine
bioclipse.rdf
Bioclipse2 RDF.
php-html-writer
Write HTML tags with CSS expressions
bioclipse.swipl
Integration of SWI-Prolog into Bioclipse
bioclipse.blipkit
Integration of BLIPKIT