Christian Brandt's repositories
plasmid_analysis
Repository for https://www.nature.com/articles/s41598-019-47758-5
wet_lab_protocols
Protocols for the lab
16S-rDNA-dada2-pipeline
**DEFUNCT** dada2-based Nextflow pipeline for multiple amplicon data. See website for up-to-date version
Rep3_K_metar
metareport
abricate
:mag_right: :pill: Mass screening of contigs for antimicrobial and virulence genes
Language:PerlGPL-2.0000
docker_files
docker_files
Language:DockerfileGPL-3.0000
docker_files_gpu
nvidia docker files
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docker_files_large
Larger Docker files
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FindTelomeres
A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files
ggpubr
'ggplot2' Based Publication Ready Plots
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ideel
Indels are not ideal - quick test for interrupted ORFs in bacterial/microbial genomes
Language:R000
Language:Nextflow000
Language:ShellGPL-3.0000
Rep4_Sequence_Tools
Smaller Scripts and Tools for Seq. data
Language:ShellGPL-3.0000
Rep5_python-start
First python stuff for learning purpose
Language:PythonGPL-3.0000