plger

Pierre-Luc's starred repositories

ComfyUI

The most powerful and modular stable diffusion GUI, api and backend with a graph/nodes interface.

Language:PythonGPL-3.043774 342 2596

stablediffusion

High-Resolution Image Synthesis with Latent Diffusion Models

Language:PythonMIT37866 445 296

StarSpace

Learning embeddings for classification, retrieval and ranking.

Language:C++MIT3928 177 199

ggstatsplot

Enhancing {ggplot2} plots with statistical analysis 📊📣

Language:RGPL-3.01965 45 586

hrbrthemes

:lock_with_ink_pen: Opinionated, typographic-centric ggplot2 themes and theme components

Language:RNOASSERTION1218 24 47

vroom

Fast reading of delimited files

Language:C++NOASSERTION616 18 461

ggh4x

ggplot extension: options for tailored facets, multiple colourscales and miscellaneous

Language:RNOASSERTION541 9 151

waiter

🕰️ Loading screens for Shiny

Language:JavaScriptNOASSERTION494 8 128

juicer

A One-Click System for Analyzing Loop-Resolution Hi-C Experiments

Language:ShellMIT403 17 309

flow

View and Browse Code Using Flow Diagrams

Language:RNOASSERTION397 16 126

GLUE

Graph-linked unified embedding for single-cell multi-omics data integration

Language:PythonMIT354 7 118

presto

Fast Wilcoxon and auROC

Language:Jupyter Notebook148 14 26

rbbt

R Interface to the Better BiBTex Zotero Connector

Language:R144 11 33

dorothea

R package to access DoRothEA's regulons

Language:RGPL-3.0126 15 48

MOODS

MOODS: Motif Occurrence Detection Suite

Language:C++NOASSERTION95 7 41

RcppML

Rcpp Machine Learning: Fast robust NMF, divisive clustering, and more

Language:C++GPL-2.091 3 31

caper

Cromwell/WDL wrapper for Python

Language:PythonMIT50 12 87

sketcher

Photo to sketch effects in R

Language:RNOASSERTION42 20

FigR

Functional Inference of Gene Regulation

Language:HTMLMIT32 5 43

DWLS

Gene expression deconvolution using dampened weighted least squares

Language:R20 2 18

pavpop

An R package for analysis of curve data with phase and amplitude variation

Language:R1900

SIGMA

R package for SIGMA, a clusterability measure for scRNA-seq data

Language:RGPL-3.01200

learn2count

Structure learning based for zero-inflated negative binomial data

Language:R10 3 6

oveRlay

Annotate 2D point clouds using overlay polygons

Language:RNOASSERTION10 1 2

VplotR

R package to easily generate "V-plots" of paired-end sequencing data over regions of interest

Language:RGPL-3.09 2 11

BMO

BMO - a tool for predicting TF binding from ATAC-seq data

Language:RGPL-3.09 5 3

BNPmix

Bayesian Nonparametric Mixture models

Language:C++LGPL-3.07 10

3D-ETG

Leveraging three-dimensional chromatin architecture for effective reconstruction of enhancer-target gene regulatory interactions

Language:R300

contributed-project-templates

A repository of community-developed project templates.

Language:PythonApache-2.0200

omnipath_analysis

analysis and visualization workflows for the OmniPath 2 paper

Language:PythonGPL-3.01 4 1